GGGenome | Results

データベース：

ミスマッチ/ギャップを許容ミスマッチのみ許容：塩基まで (検索する配列長の25%まで)
双方向を検索＋方向のみ検索－方向のみ検索

2025-04-03 06:49:59, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Phalacrocorax aristotelis genome assembly, chromosome: 6.
OX451228.1:3713657-3713675

TCTTTTTTTAAACAGATTAAAAGAAACTAA3713657CCGCCATATGGGAGAAGAAAAACAAAAATTAGATGCATTCATTCATGCT

Phalacrocorax carbo genome assembly, chromosome: 6.
OY997607.1:3712497-3712515

TTTTTTTTTTAACAGATTAAAAGAAACTAA3712497CCGCCATATGGGAGAAGAAAAACAAAAATTAGATGCATTCATTCATGCT

WS00958.B21_N02 IS-B-N-A-10 Picea engelmannii x Picea glauca cDNA clone WS00958_N02 3, mRNA sequence.
DR473378.1:421-439

CCAAGAATTTTCTTACGCTAAACGAGCTTG421CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

WS02623.BR_M08 WS-PP-N-A-12 Picea glauca cDNA clone WS02623_M08 5, mRNA sequence.
DR569109.1:182-200

CCAAGAATTTTCTTACGCTAAACGAGCTTG182CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCTAGGGTCTGCAT

WS03710.C21_M18 SS-B-N-22 Picea sitchensis cDNA clone WS03710_M18 3', mRNA sequence.
ES250384.1:167-185

CCAAGAATTTTCTTACGCTAAACGAGCTTG167CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

WS03923.C21_H20 SS-B-24 Picea sitchensis cDNA clone WS03923_H20 3', mRNA sequence.
ES664160.1:173-191

CCAAGAATTTTCTTACGCTAAACGAGCTTG173CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

WS02756.CR_E20 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02756_E20 3', mRNA sequence.
ES852553.1:168-186

CCAAGAATTTTCTTACGCTAAACGAGCTTG168CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

WS02761.CR_J24 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02761_J24 3', mRNA sequence.
ES854370.1:68-86

CCAAGAATTTTCTTACGCTAAACGAGCTTG68CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

WS02772.CR_A17 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02772_A17 3', mRNA sequence.
ES857504.1:18-36

TACGCTAAACGAGCTTG18CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

WS02780.CR.1_H20 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02780_H20 3', mRNA sequence.
ES860132.1:117-135

CCAAGAATTTTCTTACGCTAAACGAGCTTG117CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

GQ02804.B7_B04 GQ028 - Cambium / phloem scrappings (Normalized library) Picea glauca cDNA clone GQ02804_B04 5', mRNA sequence.
EX312219.1:372-390

CCAAGAATTTTCTTACGCTAAACGAGCTTG372CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCTAGGGTCTGCAT

GQ03211.B7_H19 GQ032 - Shoot tip (Normalized library) Picea glauca cDNA clone GQ03211_H19 5', mRNA sequence.
EX366400.1:92-110

CCAAGAATTTTCTTACGCTAAACGAGCTTG92CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCTAGGGTCTGCAT

GQ03233.B7.1_F03 GQ032 - Shoot tip (Normalized library) Picea glauca cDNA clone GQ03233_F03 5', mRNA sequence.
EX376577.1:536-554

CCAAGAATTTTCTTACGCTAAACGAGCTTG536CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCTAGGGTCTGCAT

GQ03233.B7_F03 GQ032 - Shoot tip (Normalized library) Picea glauca cDNA clone GQ03233_F03 5', mRNA sequence.
EX376944.1:536-554

CCAAGAATTTTCTTACGCTAAACGAGCTTG536CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCTAGGGTCTGCAT

GQ03512.B7_A08 GQ035 - Needles - End of season Picea glauca cDNA clone GQ03512_A08 5', mRNA sequence.
EX404999.1:338-356

CCAAGAATTTTCTTACGCTAAACGAGCTTG338CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCTAGGGTCTGCAT

GQ03603.B7_C19 GQ036 - Shoot tip - Active growth Picea glauca cDNA clone GQ03603_C19 5', mRNA sequence.
EX408734.1:319-337

CCAAGAATTTTCTTACGCTAAACGAGCTTG319CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

WS04215.C21_J14 SS-NE-27 Picea sitchensis cDNA clone WS04215_J14 3', mRNA sequence.
FD740661.1:59-77

CCAAGAATTTTCTTACGCTAAACGAGCTTG59CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

WS04230.C21_E04 SS-NE-27 Picea sitchensis cDNA clone WS04230_E04 3', mRNA sequence.
FD745957.1:133-151

CCAAGAATTTTCTTACGCTAAACGAGCTTG133CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

TSA: Picea abies isotig13873.Piabrootsinf mRNA sequence.
JP435626.1:130-148

CCAAGAATTTTCTTACGCTAAACGAGCTTG130CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea glauca clone GQ03204_B13 mRNA sequence.
BT109050.1:887-905

CCAAGAATTTTCTTACGCTAAACGAGCTTG887CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea glauca clone GQ04003_K11 mRNA sequence.
BT118211.1:936-954

CCAAGAATTTCCTTACTGTAAATGAGCTTG936CCGCCATATGGGAGAAGAAGATCGGAAAGACGCTGCCCAGGGTCTGCAT

Picea sitchensis clone WS02723_K23 unknown mRNA.
EF082603.1:888-906

CCAAGAATTTTCTTACGCTAAACGAGCTTG888CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis clone WS02910_O01 unknown mRNA.
EF678261.1:1193-1211

CCAAGAATTTTCTTACGCTAAACGAGCTTG1193CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate CR100 isoflavone reductase-like protein mRNA, partial cds.
HM202868.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate CR101 isoflavone reductase-like protein mRNA, partial cds.
HM202869.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate CR200 isoflavone reductase-like protein mRNA, partial cds.
HM202870.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate CR201 isoflavone reductase-like protein mRNA, partial cds.
HM202871.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate CR300 isoflavone reductase-like protein mRNA, partial cds.
HM202872.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate CR301 isoflavone reductase-like protein mRNA, partial cds.
HM202873.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate CR400 isoflavone reductase-like protein mRNA, partial cds.
HM202874.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate CR401 isoflavone reductase-like protein mRNA, partial cds.
HM202875.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate KD100 isoflavone reductase-like protein mRNA, partial cds.
HM202876.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate KD101 isoflavone reductase-like protein mRNA, partial cds.
HM202877.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate KD200 isoflavone reductase-like protein mRNA, partial cds.
HM202878.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate KD201 isoflavone reductase-like protein mRNA, partial cds.
HM202879.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate KD300 isoflavone reductase-like protein mRNA, partial cds.
HM202880.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate KD301 isoflavone reductase-like protein mRNA, partial cds.
HM202881.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate KD400 isoflavone reductase-like protein mRNA, partial cds.
HM202882.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate KD401 isoflavone reductase-like protein mRNA, partial cds.
HM202883.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate PR100 isoflavone reductase-like protein mRNA, partial cds.
HM202884.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate PR101 isoflavone reductase-like protein mRNA, partial cds.
HM202885.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate PR200 isoflavone reductase-like protein mRNA, partial cds.
HM202886.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate PR201 isoflavone reductase-like protein mRNA, partial cds.
HM202887.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate PR300 isoflavone reductase-like protein mRNA, partial cds.
HM202888.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate PR301 isoflavone reductase-like protein mRNA, partial cds.
HM202889.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate PR400 isoflavone reductase-like protein mRNA, partial cds.
HM202890.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate PR401 isoflavone reductase-like protein mRNA, partial cds.
HM202891.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate RW100 isoflavone reductase-like protein mRNA, partial cds.
HM202892.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate RW101 isoflavone reductase-like protein mRNA, partial cds.
HM202893.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate RW200 isoflavone reductase-like protein mRNA, partial cds.
HM202894.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate RW201 isoflavone reductase-like protein mRNA, partial cds.
HM202895.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate RW300 isoflavone reductase-like protein mRNA, partial cds.
HM202896.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate RW301 isoflavone reductase-like protein mRNA, partial cds.
HM202897.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate RW400 isoflavone reductase-like protein mRNA, partial cds.
HM202898.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate RW401 isoflavone reductase-like protein mRNA, partial cds.
HM202899.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate VA100 isoflavone reductase-like protein mRNA, partial cds.
HM202900.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate VA101 isoflavone reductase-like protein mRNA, partial cds.
HM202901.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate VA200 isoflavone reductase-like protein mRNA, partial cds.
HM202902.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate VA201 isoflavone reductase-like protein mRNA, partial cds.
HM202903.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate VA300 isoflavone reductase-like protein mRNA, partial cds.
HM202904.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate VA301 isoflavone reductase-like protein mRNA, partial cds.
HM202905.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate VA400 isoflavone reductase-like protein mRNA, partial cds.
HM202906.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate VA401 isoflavone reductase-like protein mRNA, partial cds.
HM202907.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate VD100 isoflavone reductase-like protein mRNA, partial cds.
HM202908.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate VD101 isoflavone reductase-like protein mRNA, partial cds.
HM202909.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate VD200 isoflavone reductase-like protein mRNA, partial cds.
HM202910.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate VD201 isoflavone reductase-like protein mRNA, partial cds.
HM202911.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate VD300 isoflavone reductase-like protein mRNA, partial cds.
HM202912.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Picea sitchensis isolate VD301 isoflavone reductase-like protein mRNA, partial cds.
HM202913.1:722-740

CCAAGAATTTTCTTACGCTAAACGAGCTTG722CCGCCATATGGGAGAAGAAGATTTCAAAGACCCTGCCCAGGGTCTGCAT

Aegilops speltoides subsp. speltoides genome assembly, chromosome: 5B.
OX082601.1:487971570-487971588

GGTGGGGGGAACAGATATTGGGTCCATGTG487971570CCGCCATATGGGAGAAGAACAAAAGGTGAGTGTAGACGATGTCATGGTG

Euphorbia lathyris genome assembly, chromosome: 7.
OY755226.1:42827989-42828007

AAAAAGAGAGTGCAGACTTGAAAGCTTTTG42827989CCGCCATATGGGAGAAGAAATTGATTTAGATTGGCCGAGCATTAATGTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

タブ区切りテキスト → 表示 | ダウンロード
エクセル等の表計算ソフトに直接コピペできます。
CSV形式 → 表示 | ダウンロード
エクセル等の表計算ソフトにて開くことができます。
BED形式 → リンク | ダウンロード
GFF形式 → リンク | ダウンロード
JSON形式 → リンク | ダウンロード

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCGCCATATGGGAGAAGAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCGCCATATGGGAGAAGAA | format : html | download : | debug :

0.009 | 0.009 | search_start;
1.444 | 1.436 | search_plus_done; http://172.18.8.135:50400/match?q=CCGCCATATGGGAGAAGAA&k=0&no_gap=0&offset=0&limit=50
1.596 | 0.152 | search_minus_done; http://172.18.8.135:50400/match?q=TTCTTCTCCCATATGGCGG&k=0&no_gap=0&offset=0&limit=0
1.596 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).